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  5. Sobic.002G233700.1

Sobic.002G233700.1


Description : dicarboxylate


Gene families : OG_42_0001496 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G233700.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Bradi4g06300 No alias dicarboxylate transporter 1 0.03 Orthogroups_2024-Update
Bradi4g32730 No alias dicarboxylate transport 2.1 0.05 Orthogroups_2024-Update
Brara.I00773.1 No alias dicarboxylate 0.02 Orthogroups_2024-Update
GRMZM2G086258 No alias dicarboxylate transport 2.1 0.02 Orthogroups_2024-Update
Glyma.11G133800 No alias dicarboxylate transporter 1 0.08 Orthogroups_2024-Update
Glyma.12G058000 No alias dicarboxylate transporter 1 0.04 Orthogroups_2024-Update
Glyma.15G055600 No alias dicarboxylate transport 2.1 0.03 Orthogroups_2024-Update
HORVU5Hr1G027720.1 No alias dicarboxylate 0.03 Orthogroups_2024-Update
LOC_Os12g33080 No alias 2-oxoglutarate/malate translocator, chloroplast... 0.06 Orthogroups_2024-Update
Mp3g25390.1 No alias dicarboxylate:malate antiporter (DIT) 0.03 Orthogroups_2024-Update
PSME_00024391-RA No alias (at5g12860 : 766.0) dicarboxylate transporter 1 (DiT1);... 0.02 Orthogroups_2024-Update
Potri.001G310600 No alias dicarboxylate transport 2.1 0.04 Orthogroups_2024-Update
Seita.2G236900.1 No alias dicarboxylate 0.09 Orthogroups_2024-Update
Seita.3G350700.1 No alias dicarboxylate 0.05 Orthogroups_2024-Update
Seita.6G187500.1 No alias dicarboxylate 0.04 Orthogroups_2024-Update
Seita.9G375100.1 No alias dicarboxylate 0.09 Orthogroups_2024-Update
Solyc11g065830 No alias 2-oxoglutarate/malate translocator, chloroplastic (AHRD... 0.05 Orthogroups_2024-Update
Sopen11g025580 No alias Sodium:sulfate symporter transmembrane region 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001898 SLC13A/DASS 89 556
No external refs found!