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  5. Sobic.002G236200.3

Sobic.002G236200.3


Description : bHLH-type transcription factor


Gene families : OG_42_0001713 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G236200.3
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Bradi3g56340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G072300.14 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Sopen03g033800 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 167 216
No external refs found!