At3g47500

Description : Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g47500
Cluster	HCCA clusters: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
29563	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
89924	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
A4A49_23576	No alias	dof zinc finger protein dof5.4	0.03	Orthogroups_2024-Update
At1g26790	No alias	Dof-type zinc finger DNA-binding family protein...	0.04	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Brara.C04204.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Brara.E01618.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.07	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.07	Orthogroups_2024-Update
Brara.G02475.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I03146.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
GRMZM2G134545	No alias	TARGET OF MONOPTEROS 6	0.04	Orthogroups_2024-Update
GRMZM2G142718	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
GRMZM2G394941	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
GRMZM2G589696	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.06	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU3Hr1G116220.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU7Hr1G043250.2	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Kfl00762_0030	kfl00762_0030_v1.1	(at5g39660 : 127.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
LOC_Os02g45200	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.03	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.005G188900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Potri.011G054300	No alias	OBF binding protein 4	0.04	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s37_7V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.4G124800.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.003G121400.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.04	Orthogroups_2024-Update
Solyc03g115940	No alias	Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA)	0.02	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.04	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.04	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g023480	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g026650	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g027050	No alias	Dof domain, zinc finger	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
BP	GO:0006955	immune response	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
MF	GO:0009975	cyclase activity	IEP	Predicted GO
MF	GO:0009976	tocopherol cyclase activity	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030008	TRAPP complex	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
BP	GO:0045087	innate immune response	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	108	164

External Links

No external refs found!

At3g47500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation