Sobic.002G242500.2

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G242500.2

Target	Alias	Description	ECC score	Gene Family Method
66769	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
81371	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
At2g30250	No alias	Probable WRKY transcription factor 25...	0.02	Orthogroups_2024-Update
At4g23810	No alias	Probable WRKY transcription factor 53...	0.02	Orthogroups_2024-Update
Bradi1g47690	No alias	WRKY family transcription factor family protein	0.01	Orthogroups_2024-Update
Bradi1g63910	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g45290	No alias	WRKY family transcription factor family protein	0.01	Orthogroups_2024-Update
GRMZM2G005207	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
HORVU3Hr1G033740.2	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
HORVU3Hr1G050590.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G013890.3	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
HORVU6Hr1G067680.3	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
LOC_Os01g09080	No alias	WRKY107, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g09100	No alias	WRKY10, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g43650	No alias	WRKY11, expressed	0.01	Orthogroups_2024-Update
LOC_Os01g62514	No alias	WRKY56, expressed	0.01	Orthogroups_2024-Update
LOC_Os05g46020	No alias	WRKY7, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g29660	No alias	WRKY69, expressed	0.01	Orthogroups_2024-Update
MA_161426g0010	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_164675g0010	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.01	Orthogroups_2024-Update
MA_381058g0010	No alias	(at1g68150 : 80.5) member of WRKY Transcription Factor;...	0.01	Orthogroups_2024-Update
MA_74833g0010	No alias	(at5g15130 : 181.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_934202g0010	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.01	Orthogroups_2024-Update
PSME_00015239-RA	No alias	(at1g18860 : 197.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00028886-RA	No alias	(at5g15130 : 207.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00039002-RA	No alias	(at5g26170 : 112.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00043147-RA	No alias	(at4g22070 : 278.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Seita.5G306000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G361700.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.001G083000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G000600.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G248400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sopen02g033030	No alias	WRKY DNA -binding domain	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	386	443

External Links

No external refs found!

Sobic.002G242500.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation