Description : Pentatricopeptide repeat-containing protein At3g47530 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN85]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At3g47530 | |
Cluster | HCCA clusters: Cluster_239 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
136134 | No alias | mitochondrial editing factor 22 | 0.02 | Orthogroups_2024-Update | |
AC209718.1_FG009 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g51740 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.A00680.1 | No alias | RNA editing factor *(MEF29) | 0.03 | Orthogroups_2024-Update | |
Brara.A00983.1 | No alias | RNA editing factor *(DOT4) | 0.03 | Orthogroups_2024-Update | |
GRMZM2G031588 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G040947 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G099875 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G103078 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G144071 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G163396 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G168378 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G440349 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
GRMZM5G862936 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G230100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G024180.8 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g02200 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.006G105700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.5G460300.1 | No alias | RNA editing factor *(OTP72) | 0.03 | Orthogroups_2024-Update | |
Sobic.001G001200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
Sobic.004G266300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G116400.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen09g031050 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
No external refs found! |