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  5. Sobic.002G249000.1

Sobic.002G249000.1


Description : AHL clade-B transcription factor


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G249000.1
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_13238 No alias at-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update
Bradi4g42740 No alias AT-hook motif nuclear-localized protein 1 0.02 Orthogroups_2024-Update
Brara.G01916.1 No alias AHL clade-B transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G012410.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g31470 No alias AT hook motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.001G104900 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Sobic.004G352100.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G035000.1 No alias AHL clade-B transcription factor 0.05 Orthogroups_2024-Update
Sopen08g003490 No alias Domain of unknown function (DUF296) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 182 296
No external refs found!