1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G249200.1

Sobic.002G249200.1


Description : auxin efflux transporter *(PILS) & auxin transporter *(PILS)


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G249200.1
Cluster HCAA Clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G201600 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
Seita.2G255200.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.05 Orthogroups_2024-Update
Seita.2G255500.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.04 Orthogroups_2024-Update
Sobic.002G249400.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Solyc02g091240 No alias Auxin efflux carrier (AHRD V3.3 *** A0A103XKJ3_CYNCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 11 405
No external refs found!