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  5. Sobic.002G253800.1

Sobic.002G253800.1


Description : P2B-type calcium cation-transporting ATPase *(ACA)


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G253800.1
Cluster HCAA Clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
A4A49_12287 No alias putative calcium-transporting atpase 11, plasma membrane-type 0.03 Orthogroups_2024-Update
A4A49_23243 No alias calcium-transporting atpase 9, plasma membrane-type 0.03 Orthogroups_2024-Update
At3g63380 No alias Calcium-transporting ATPase... 0.03 Orthogroups_2024-Update
Bradi3g40640 No alias autoinhibited Ca2+ -ATPase, isoform 8 0.02 Orthogroups_2024-Update
Bradi4g03130 No alias autoinhibited Ca2+-ATPase 1 0.02 Orthogroups_2024-Update
Bradi4g43300 No alias autoinhibited Ca2+-ATPase 11 0.02 Orthogroups_2024-Update
GRMZM2G340139 No alias autoinhibited Ca(2+)-ATPase 9 0.04 Orthogroups_2024-Update
Glyma.07G004300 No alias autoinhibited Ca(2+)-ATPase 9 0.04 Orthogroups_2024-Update
HORVU1Hr1G076950.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Kfl00142_0160 kfl00142_0160_v1.... (at4g37640 : 958.0) Encodes a calmodulin-regulated... 0.01 Orthogroups_2024-Update
Mp6g04030.1 No alias P2B-type calcium cation-transporting ATPase (ACA) 0.01 Orthogroups_2024-Update
Seita.2G260700.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.02 Orthogroups_2024-Update
Seita.6G201400.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Seita.7G228200.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.07 Orthogroups_2024-Update
Sobic.008G147300.3 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 136 202
IPR006068 ATPase_P-typ_cation-transptr_C 868 1043
IPR024750 Ca_ATPase_N_dom 22 65
No external refs found!