Sobic.002G256601.1


Description : Unknown function


Gene families : OG_42_0001201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001201_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G256601.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_00714 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.A03623.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C02716.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G093580.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00240_0140 kfl00240_0140_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.004G003101 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G158900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G428300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G220100.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!