Sobic.002G257900.1

Description : SBP-type transcription factor

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G257900.1
Cluster	HCAA Clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g03510	No alias	squamosa promoter binding protein-like 2	0.02	Orthogroups_2024-Update
Bradi3g41250	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
MA_47367g0010	No alias	(at1g02065 : 173.0) Encodes an SBP-box gene, a member of...	0.04	Orthogroups_2024-Update
Potri.014G057800	No alias	squamosa promoter binding protein-like 10	0.02	Orthogroups_2024-Update
Pp1s252_40V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Sopen12g018830	No alias	SBP domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	124	197

External Links

No external refs found!