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  5. Sobic.002G270300.1

Sobic.002G270300.1


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & E3 ubiquitin ligase *(EOD1)


Gene families : OG_42_0000917 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G270300.1
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
A4A49_19242 No alias e3 ubiquitin ligase big brother-related protein 0.03 Orthogroups_2024-Update
Solyc03g026150 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G63530.2) 0.04 Orthogroups_2024-Update
Sopen12g005510 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 128 170
No external refs found!