Sobic.002G275500.3


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G275500.3

Target Alias Description ECC score Gene Family Method Actions
A4A49_39488 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
At1g16490 No alias Transcription factor MYB58... 0.03 Orthogroups_2024-Update
At2g26950 No alias Transcription factor MYB104... 0.02 Orthogroups_2024-Update
At3g24310 No alias MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5] 0.04 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.04 Orthogroups_2024-Update
At3g53200 No alias Transcription factor MYB27... 0.02 Orthogroups_2024-Update
At5g12870 No alias Transcription factor MYB46... 0.02 Orthogroups_2024-Update
Bradi1g26920 No alias myb domain protein 67 0.06 Orthogroups_2024-Update
Bradi1g51747 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.05 Orthogroups_2024-Update
Bradi2g48521 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.02 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi4g36210 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Bradi4g38965 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Brara.B00461.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.B00668.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.C00664.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Brara.C03158.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03242.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.F00610.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Brara.F02806.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Brara.G01033.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.I00301.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.02 Orthogroups_2024-Update
Brara.I01367.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01999.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.02 Orthogroups_2024-Update
Brara.K01188.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G003406 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.04 Orthogroups_2024-Update
GRMZM2G167829 No alias myb domain protein 87 0.03 Orthogroups_2024-Update
GRMZM2G169356 No alias myb domain protein 20 0.04 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
GRMZM5G833253 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Glyma.03G258700 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.02 Orthogroups_2024-Update
Glyma.06G312900 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
Glyma.09G032100 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.13G247200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.13G339900 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.14G091500 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.18G040700 No alias myb domain protein 43 0.04 Orthogroups_2024-Update
Glyma.18G261400 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
HORVU2Hr1G087990.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g02370 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os07g48870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00013410-RA No alias (at5g35550 : 181.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
PSME_00017439-RA No alias (at3g13540 : 222.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
PSME_00024333-RA No alias (at1g22640 : 197.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00030703-RA No alias (p10290|mybc_maize : 187.0) Anthocyanin regulatory C1... 0.03 Orthogroups_2024-Update
PSME_00045716-RA No alias (at5g15310 : 288.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
Potri.004G126700 No alias myb domain protein 96 0.02 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Potri.014G111200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Potri.019G050900 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Seita.1G281500.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G290600.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.03 Orthogroups_2024-Update
Seita.7G161400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G181600.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G432200.1 No alias MYB class-R2R3 subgroup-7 transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G183100.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.05 Orthogroups_2024-Update
Sobic.002G201000.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G187001.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Solyc08g005870 No alias R2R3MYB transcription factor 8 0.02 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g028160 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update
Sopen09g003070 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 51 98
IPR001005 SANT/Myb 108 148
No external refs found!