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  5. Sobic.002G290900.1

Sobic.002G290900.1


Description : NAC-type transcription factor


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G290900.1
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_29314 No alias nac domain-containing protein 43 0.02 Orthogroups_2024-Update
A4A49_58267 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi3g50067 No alias NAC 007 0.04 Orthogroups_2024-Update
Bradi4g34157 No alias NAC domain containing protein 38 0.04 Orthogroups_2024-Update
Brara.A03159.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D01471.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E01767.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I02350.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G069047 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
GRMZM2G406204 No alias NAC domain containing protein 28 0.03 Orthogroups_2024-Update
Glyma.01G167900 No alias vascular related NAC-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.07G050600 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Glyma.09G231700 No alias NAC 007 0.04 Orthogroups_2024-Update
Glyma.17G101500 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
HORVU2Hr1G017350.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G017380.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G085320.4 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G075550.1 No alias NAC-type transcription factor & transcriptional... 0.05 Orthogroups_2024-Update
PSME_00009079-RA No alias (at1g65910 : 290.0) NAC domain containing protein 28... 0.02 Orthogroups_2024-Update
PSME_00053123-RA No alias (at5g53950 : 278.0) Transcriptional activator of the NAC... 0.03 Orthogroups_2024-Update
Potri.005G116800 No alias vascular related NAC-domain protein 1 0.02 Orthogroups_2024-Update
Solyc08g079120 No alias NAC domain protein, (AHRD V3.3 *** A0A061G3J0_THECC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003441 NAC-dom 7 133
No external refs found!