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  5. Sobic.002G292100.3

Sobic.002G292100.3


Description : auxin efflux transporter *(PILS) & auxin transporter *(PILS)


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G292100.3
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At1g71090 No alias Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999] 0.02 Orthogroups_2024-Update
Bradi2g61980 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
GRMZM2G072632 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Glyma.09G271100 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
MA_21662g0010 No alias (at5g65980 : 409.0) Auxin efflux carrier family protein;... 0.04 Orthogroups_2024-Update
PSME_00010166-RA No alias (at2g17500 : 377.0) Auxin efflux carrier family protein;... 0.03 Orthogroups_2024-Update
PSME_00012379-RA No alias (at5g65980 : 403.0) Auxin efflux carrier family protein;... 0.02 Orthogroups_2024-Update
Potri.011G145700 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Seita.2G255200.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.02 Orthogroups_2024-Update
Solyc02g037550 No alias Auxin efflux carrier family protein (AHRD V3.3 *** AT1G76520.2) 0.02 Orthogroups_2024-Update
Solyc02g082450 No alias Auxin efflux carrier family protein (AHRD V3.3 *** AT2G17500.4) 0.03 Orthogroups_2024-Update
Solyc12g095750 No alias Auxin efflux carrier family protein, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 406
No external refs found!