1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G293000.2

Sobic.002G293000.2


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G293000.2
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
117908 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
At2g02080 No alias Protein indeterminate-domain 4, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi2g60020 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
GRMZM2G042666 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
Glyma.04G033300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.07G009100 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Glyma.08G092300 No alias indeterminate(ID)-domain 14 0.03 Orthogroups_2024-Update
Glyma.12G207200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
MA_10428315g0010 No alias (at1g34370 : 211.0) Encodes a putative nuclear... 0.04 Orthogroups_2024-Update
Potri.017G017100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Pp1s218_34V6 No alias nucleic acid binding 0.04 Orthogroups_2024-Update
Seita.1G175100.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 71 93
No external refs found!