1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g48050

At3g48050


Description : Protein SUO [Source:UniProtKB/TrEMBL;Acc:F4JCS8]


Gene families : OG_42_0002194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g48050
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
440870 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 Orthogroups_2024-Update
Bradi3g59560 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 Orthogroups_2024-Update
Bradi3g59577 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 Orthogroups_2024-Update
GRMZM2G162859 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 Orthogroups_2024-Update
Glyma.04G180100 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
Glyma.06G184600 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
Glyma.17G092200 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
Glyma.19G012300 No alias BAH domain ;TFIIS helical bundle-like domain 0.06 Orthogroups_2024-Update
MA_10428034g0020 No alias (at3g48050 : 451.0) BAH domain ;TFIIS helical... 0.06 Orthogroups_2024-Update
Mp4g16230.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00037659-RA No alias (at3g48050 : 320.0) BAH domain ;TFIIS helical... 0.04 Orthogroups_2024-Update
Potri.012G077500 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
Potri.015G072800 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 Orthogroups_2024-Update
Seita.9G312600.1 No alias regulatory protein *(SUO) of miRNA biogenesis pathway 0.03 Orthogroups_2024-Update
Sobic.001G289600.1 No alias regulatory protein *(SUO) of miRNA biogenesis pathway 0.03 Orthogroups_2024-Update
Sobic.001G289800.2 No alias regulatory protein *(SUO) of miRNA biogenesis pathway 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 360 409
IPR001025 BAH_dom 50 160
No external refs found!