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  5. Sobic.002G299200.2

Sobic.002G299200.2


Description : Unknown function


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G299200.2
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
98227 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.05 Orthogroups_2024-Update
Brara.G02481.1 No alias regulatory protein *(AGO7) of transacting siRNA pathway 0.02 Orthogroups_2024-Update
Glyma.04G150900 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Orthogroups_2024-Update
HORVU2Hr1G098650.1 No alias siRNA-binding factor *(AGO2) of non-canonical RdDM pathway 0.03 Orthogroups_2024-Update
LOC_Os04g52540 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52550 No alias PAZ domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR032474 Argonaute_N 217 344
IPR032473 Argonaute_Mid_dom 609 685
IPR032472 ArgoL2 552 598
IPR014811 ArgoL1 359 409
IPR003165 Piwi 700 1001
IPR003100 PAZ_dom 416 542
No external refs found!