Sobic.002G302000.1

Description : xyloglucan endotransglucosylase/hydrolase *(XTH) & EC_2.4 glycosyltransferase

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G302000.1
Cluster	HCAA Clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g33810	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G101170.2	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
LOC_Os07g29750	No alias	glycosyl hydrolases family 16, putative, expressed	0.03	Orthogroups_2024-Update
MA_781557g0010	No alias	(at5g13870 : 271.0) EXGT-A4, endoxyloglucan...	0.02	Orthogroups_2024-Update
Mp2g22860.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
PSME_00040364-RA	No alias	(at4g03210 : 145.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
Potri.001G071000	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
Potri.003G159700	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
Pp1s410_28V6	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	16Dec
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	16Dec
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	16Dec
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000757	GH16	60	244
IPR010713	XET_C	278	314

External Links

No external refs found!

Sobic.002G302000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation