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  5. Sobic.002G306000.2

Sobic.002G306000.2


Description : CAMTA-type transcription factor


Gene families : OG_42_0007654 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G306000.2
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G038300 No alias calmodulin binding;transcription regulators 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005559 CG-1_dom 34 146
IPR002110 Ankyrin_rpt 580 670
IPR000048 IQ_motif_EF-hand-BS 775 793
IPR000048 IQ_motif_EF-hand-BS 879 898
IPR000048 IQ_motif_EF-hand-BS 798 817
No external refs found!