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  5. Sobic.002G310000.3

Sobic.002G310000.3


Description : Unknown function


Gene families : OG_42_0008677 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008677_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G310000.3
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g21930 No alias PPR repeat containing protein, expressed 0.02 Orthogroups_2024-Update
MA_140877g0010 No alias (at5g39710 : 282.0) EMBRYO DEFECTIVE 2745 (EMB2745);... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 367 386
IPR002885 Pentatricopeptide_repeat 434 458
IPR002885 Pentatricopeptide_repeat 399 428
IPR002885 Pentatricopeptide_repeat 289 337
IPR002885 Pentatricopeptide_repeat 219 268
No external refs found!