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  5. Sobic.002G319300.3

Sobic.002G319300.3


Description : regulatory protein *(ASPM) of microtubule minus-end stability


Gene families : OG_42_0005597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G319300.3
Cluster HCAA Clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G055460.9 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00008974-RA No alias (at4g21820 : 395.0) binding;calmodulin binding;... 0.03 Orthogroups_2024-Update
Pp1s18_325V6 No alias T8O5.30; calmodulin-binding family protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Solyc02g080390 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 844 860
IPR000048 IQ_motif_EF-hand-BS 887 903
IPR000048 IQ_motif_EF-hand-BS 732 749
IPR000048 IQ_motif_EF-hand-BS 686 703
IPR000048 IQ_motif_EF-hand-BS 804 821
IPR000048 IQ_motif_EF-hand-BS 909 927
IPR001715 CH-domain 241 331
No external refs found!