Sobic.002G319900.1

Description : Unknown function

Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G319900.1
Cluster	HCAA Clusters: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
413575	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
75451	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
A4A49_02312	No alias	aaa-atpase	0.03	Orthogroups_2024-Update
A4A49_03924	No alias	aaa-atpase	0.04	Orthogroups_2024-Update
A4A49_03997	No alias	aaa-atpase	0.03	Orthogroups_2024-Update
A4A49_25650	No alias	aaa-atpase	0.03	Orthogroups_2024-Update
A4A49_33756	No alias	protein hyper-sensitivity-related 4	0.04	Orthogroups_2024-Update
At1g43910	No alias	AAA-ATPase At1g43910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP11]	0.03	Orthogroups_2024-Update
At5g17750	No alias	AAA-ATPase At5g17750 [Source:UniProtKB/Swiss-Prot;Acc:F4KID5]	0.04	Orthogroups_2024-Update
Bradi1g54750	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Orthogroups_2024-Update
Bradi1g54760	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Orthogroups_2024-Update
Bradi1g54800	No alias	AAA-ATPase 1	0.05	Orthogroups_2024-Update
Bradi2g14590	No alias	cytochrome BC1 synthesis	0.03	Orthogroups_2024-Update
Bradi2g42940	No alias	cytochrome BC1 synthesis	0.04	Orthogroups_2024-Update
Bradi4g00460	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Brara.C01191.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.F03140.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.I01069.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I03433.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
GRMZM2G138770	No alias	AAA-ATPase 1	0.05	Orthogroups_2024-Update
GRMZM2G175593	No alias	cytochrome BC1 synthesis	0.02	Orthogroups_2024-Update
GRMZM2G180080	No alias	cytochrome BC1 synthesis	0.06	Orthogroups_2024-Update
GRMZM2G444560	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Orthogroups_2024-Update
GRMZM5G893912	No alias	AAA-ATPase 1	0.05	Orthogroups_2024-Update
Glyma.01G171300	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Orthogroups_2024-Update
Glyma.12G229000	No alias	cytochrome BC1 synthesis	0.06	Orthogroups_2024-Update
Glyma.18G254100	No alias	AAA-ATPase 1	0.02	Orthogroups_2024-Update
HORVU1Hr1G093600.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU2Hr1G046180.2	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU3Hr1G057540.3	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU5Hr1G000640.4	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU5Hr1G019820.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G107410.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU7Hr1G098220.4	No alias	Unknown function	0.04	Orthogroups_2024-Update
Kfl00241_0050	kfl00241_0050_v1.1	(at3g50940 : 120.0) P-loop containing nucleoside...	0.02	Orthogroups_2024-Update
LOC_Os09g26260	No alias	AAA-type ATPase family protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_10430798g0020	No alias	(at3g28510 : 153.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
MA_10435321g0030	No alias	(at5g57480 : 180.0) P-loop containing nucleoside...	0.02	Orthogroups_2024-Update
MA_10435468g0020	No alias	(at3g28510 : 255.0) P-loop containing nucleoside...	0.04	Orthogroups_2024-Update
MA_16312g0010	No alias	(at5g40010 : 192.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
MA_165229g0020	No alias	(at4g25835 : 368.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
MA_230170g0010	No alias	(at3g28580 : 223.0) P-loop containing nucleoside...	0.04	Orthogroups_2024-Update
MA_23842g0010	No alias	(at5g40010 : 366.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
MA_354684g0010	No alias	(at3g28510 : 341.0) P-loop containing nucleoside...	0.04	Orthogroups_2024-Update
MA_39416g0010	No alias	(at3g28510 : 238.0) P-loop containing nucleoside...	0.02	Orthogroups_2024-Update
PSME_00011756-RA	No alias	(at4g30250 : 363.0) P-loop containing nucleoside...	0.07	Orthogroups_2024-Update
PSME_00029894-RA	No alias	(at5g57480 : 373.0) P-loop containing nucleoside...	0.04	Orthogroups_2024-Update
PSME_00045245-RA	No alias	(at5g40010 : 174.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
Potri.004G012500	No alias	AAA-ATPase 1	0.04	Orthogroups_2024-Update
Potri.004G091300	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Potri.005G119200	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.06	Orthogroups_2024-Update
Potri.007G012400	No alias	cytochrome BC1 synthesis	0.02	Orthogroups_2024-Update
Potri.007G020500	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Orthogroups_2024-Update
Potri.008G177200	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Orthogroups_2024-Update
Potri.T171900	No alias	cytochrome BC1 synthesis	0.04	Orthogroups_2024-Update
Potri.T172000	No alias	cytochrome BC1 synthesis	0.05	Orthogroups_2024-Update
Seita.2G213800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G124600.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.3G407200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.4G245200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G218000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.9G050000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.9G358900.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.9G394700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G051600.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sobic.002G067300.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G210100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G252400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc02g062550	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Solyc02g084900	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Solyc02g087540	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.06	Orthogroups_2024-Update
Solyc04g080680	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Orthogroups_2024-Update
Solyc05g007470	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Orthogroups_2024-Update
Solyc10g007280	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Orthogroups_2024-Update
Sopen02g013560	No alias	Domain associated at C-terminal with AAA	0.03	Orthogroups_2024-Update
Sopen02g029570	No alias	Domain associated at C-terminal with AAA	0.03	Orthogroups_2024-Update
Sopen03g006600	No alias	Domain associated at C-terminal with AAA	0.03	Orthogroups_2024-Update
Sopen04g034270	No alias	Domain associated at C-terminal with AAA	0.03	Orthogroups_2024-Update
Sopen10g003100	No alias	Domain associated at C-terminal with AAA	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	386	434
IPR003959	ATPase_AAA_core	277	340
IPR025753	AAA_N_dom	54	160

External Links

No external refs found!

Sobic.002G319900.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation