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  5. Sobic.002G321800.2

Sobic.002G321800.2


Description : component *(eL42) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001870 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001870_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G321800.2
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
161986 No alias Zinc-binding ribosomal protein family protein 0.02 Orthogroups_2024-Update
A4A49_63762 No alias 60s ribosomal protein l44 0.03 Orthogroups_2024-Update
GRMZM2G009412 No alias Zinc-binding ribosomal protein family protein 0.02 Orthogroups_2024-Update
Glyma.15G051000 No alias Zinc-binding ribosomal protein family protein 0.04 Orthogroups_2024-Update
Mp2g25770.1 No alias component RPL36a of LSU proteome component 0.03 Orthogroups_2024-Update
Pp1s115_63V6 No alias 60s ribosomal protein l44 0.02 Orthogroups_2024-Update
Pp1s22_326V6 No alias 60s ribosomal protein l44 0.02 Orthogroups_2024-Update
Pp1s6_198V6 No alias 60s ribosomal protein l44 0.03 Orthogroups_2024-Update
Pp1s74_73V6 No alias 60s ribosomal protein l44 0.02 Orthogroups_2024-Update
Solyc03g112850 No alias 60S ribosomal protein L44 (AHRD V3.3 *** RL44_GOSHI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003964 RNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 27 93
No external refs found!