Sobic.002G329500.1

Description : EC_3.2 glycosylase & beta amylase

Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G329500.1
Cluster	HCAA Clusters: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
A4A49_37406	No alias	inactive beta-amylase 9	0.03	Orthogroups_2024-Update
At2g32290	No alias	Beta-amylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L762]	0.04	Orthogroups_2024-Update
At4g17090	No alias	Beta-amylase 3, chloroplastic...	0.04	Orthogroups_2024-Update
Brara.G00610.1	No alias	EC_3.2 glycosylase & beta amylase	0.02	Orthogroups_2024-Update
Brara.H00800.1	No alias	EC_3.2 glycosylase & beta amylase	0.04	Orthogroups_2024-Update
Glyma.05G068000	No alias	chloroplast beta-amylase	0.04	Orthogroups_2024-Update
HORVU2Hr1G043920.3	No alias	EC_3.2 glycosylase & beta amylase	0.04	Orthogroups_2024-Update
HORVU4Hr1G084390.1	No alias	EC_3.2 glycosylase & beta amylase	0.03	Orthogroups_2024-Update
LOC_Os10g41550	No alias	beta-amylase, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00015609-RA	No alias	(at4g17090 : 667.0) Encodes a beta-amylase targeted to...	0.03	Orthogroups_2024-Update
PSME_00015611-RA	No alias	(at4g17090 : 549.0) Encodes a beta-amylase targeted to...	0.03	Orthogroups_2024-Update
PSME_00049129-RA	No alias	(at3g23920 : 726.0) Encodes a chloroplast beta-amylase....	0.03	Orthogroups_2024-Update
Solyc07g052690	No alias	Beta-amylase (AHRD V3.3 - K4CFG8_SOLLC)	0.03	Orthogroups_2024-Update
Sopen09g034010	No alias	Glycosyl hydrolase family 14	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	16Dec
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Predicted GO
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005886	plasma membrane	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0006873	cellular ion homeostasis	IEP	Predicted GO
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
BP	GO:0015994	chlorophyll metabolic process	IEP	Predicted GO
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
BP	GO:0030003	cellular cation homeostasis	IEP	Predicted GO
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0048878	chemical homeostasis	IEP	Predicted GO
BP	GO:0050801	ion homeostasis	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
BP	GO:0051188	cofactor biosynthetic process	IEP	Predicted GO
BP	GO:0055065	metal ion homeostasis	IEP	Predicted GO
BP	GO:0055071	manganese ion homeostasis	IEP	Predicted GO
BP	GO:0055076	transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0055080	cation homeostasis	IEP	Predicted GO
BP	GO:0055082	cellular chemical homeostasis	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:0098771	inorganic ion homeostasis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	13	435

External Links

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Sobic.002G329500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation