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  5. Sobic.002G337800.1

Sobic.002G337800.1


Description : MYB class-R2R3 subgroup-11 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G337800.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
84195 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
At3g24310 No alias MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5] 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.05 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.05 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.05 Orthogroups_2024-Update
Bradi4g16290 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Brara.D00115.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
GRMZM2G104551 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Glyma.14G214500 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Glyma.19G119300 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
HORVU0Hr1G005100.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.03 Orthogroups_2024-Update
HORVU5Hr1G083910.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
MA_9818613g0010 No alias (p10290|mybc_maize : 180.0) Anthocyanin regulatory C1... 0.08 Orthogroups_2024-Update
Mp3g05910.1 No alias transcription factor (MYB) 0.03 Orthogroups_2024-Update
PSME_00023605-RA No alias (p20026|myb1_horvu : 272.0) Myb-related protein Hv1 -... 0.05 Orthogroups_2024-Update
PSME_00024333-RA No alias (at1g22640 : 197.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.04 Orthogroups_2024-Update
Pp1s238_70V6 No alias transcription factor 0.03 Orthogroups_2024-Update
Seita.4G086300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G074800.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sopen03g035070 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!