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  5. Sobic.002G342000.1

Sobic.002G342000.1


Description : clade E phosphatase


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G342000.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_32995 No alias putative protein phosphatase 2c 72 0.02 Orthogroups_2024-Update
A4A49_35919 No alias putative protein phosphatase 2c 34 0.02 Orthogroups_2024-Update
Bradi3g43360 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Brara.K00678.1 No alias clade E phosphatase 0.03 Orthogroups_2024-Update
Glyma.03G043020 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
Glyma.03G043100 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G059140.2 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00050028-RA No alias (at3g02750 : 441.0) Protein phosphatase 2C family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 75 314
No external refs found!