Sobic.002G342100.2

Description : NAC-type transcription factor

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G342100.2
Cluster	HCAA Clusters: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method
147012	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
A4A49_40664	No alias	nac transcription factor 56	0.03	Orthogroups_2024-Update
Bradi1g04150	No alias	NAC domain containing protein 102	0.04	Orthogroups_2024-Update
Bradi1g17480	No alias	NAC domain containing protein 47	0.03	Orthogroups_2024-Update
Brara.A03131.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F00162.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G021800.2	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os07g48450	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g07790	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00017053-RA	No alias	(at1g01720 : 241.0) Belongs to a large family of...	0.02	Orthogroups_2024-Update
PSME_00030259-RA	No alias	(q7f2l3\|nac48_orysa : 263.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00035776-RA	No alias	(at3g15510 : 277.0) Note of caution: not to be confused...	0.03	Orthogroups_2024-Update
PSME_00050136-RA	No alias	(q52qh4\|nac68_orysa : 294.0) NAC domain-containing...	0.02	Orthogroups_2024-Update
PSME_00050686-RA	No alias	(q52qh4\|nac68_orysa : 274.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
Pp1s259_67V6	No alias	nac domain-containing	0.02	Orthogroups_2024-Update
Seita.2G436000.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G358900.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G407700.1	No alias	NAC-type transcription factor	0.01	Orthogroups_2024-Update
Seita.8G008100.1	No alias	NAC-type transcription factor	0.06	Orthogroups_2024-Update
Seita.9G417600.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G021800.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc06g060230	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006788	heme oxidation	IEP	Predicted GO
BP	GO:0008285	negative regulation of cell proliferation	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0042127	regulation of cell proliferation	IEP	Predicted GO
BP	GO:0042168	heme metabolic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0048519	negative regulation of biological process	IEP	Predicted GO
BP	GO:0048523	negative regulation of cellular process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	28	155

External Links

No external refs found!

Sobic.002G342100.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation