Sobic.002G345200.1

Description : assembly factor involved in RuBisCo assembly *(RbcX)

Gene families : OG_42_0003251 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003251_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G345200.1
Cluster	HCAA Clusters: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
At5g19855	No alias	RbcX2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCQ2]	0.02	Orthogroups_2024-Update
Brara.C00897.1	No alias	assembly factor involved in RuBisCo assembly *(RbcX)	0.04	Orthogroups_2024-Update
Brara.J01608.1	No alias	assembly factor involved in RuBisCo assembly *(RbcX)	0.03	Orthogroups_2024-Update
Glyma.18G070500	No alias	Chaperonin-like RbcX protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G093930.4	No alias	assembly factor involved in RuBisCo assembly *(RbcX)	0.02	Orthogroups_2024-Update
HORVU5Hr1G109940.1	No alias	assembly factor involved in RuBisCo assembly *(RbcX)	0.04	Orthogroups_2024-Update
LOC_Os07g38230	No alias	expressed protein	0.05	Orthogroups_2024-Update
Seita.2G358500.1	No alias	assembly factor involved in RuBisCo assembly *(RbcX)	0.02	Orthogroups_2024-Update
Sopen01g034250	No alias	RbcX protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
MF	GO:0044183	protein binding involved in protein folding	IEA	16Dec
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0110102	chloroplast ribulose bisphosphate carboxylase complex assembly	IEA	16Dec

Type	GO Term	Name	Evidence	Source
MF	GO:0004366	glycerol-3-phosphate O-acyltransferase activity	IEP	Predicted GO
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0005856	cytoskeleton	IEP	Predicted GO
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003435	Chaperonin_RcbX	87	157

External Links

No external refs found!