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  5. Sobic.002G350500.1

Sobic.002G350500.1


Description : transcription factor *(ERN1) & subgroup ERF-V transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G350500.1
Cluster HCAA Clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
A4A49_15089 No alias dehydration-responsive element-binding protein 3 0.04 Orthogroups_2024-Update
A4A49_16579 No alias ethylene-responsive transcription factor abr1 0.02 Orthogroups_2024-Update
A4A49_16905 No alias ethylene-responsive transcription factor 5 0.03 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.04 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.02 Orthogroups_2024-Update
A4A49_30015 No alias ethylene-responsive transcription factor erf019 0.02 Orthogroups_2024-Update
A4A49_35180 No alias ethylene-responsive transcription factor 1b 0.02 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.02 Orthogroups_2024-Update
AC187157.4_FG001 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At1g12610 No alias Dehydration-responsive element-binding protein 1F... 0.03 Orthogroups_2024-Update
At1g63030 No alias Dehydration-responsive element-binding protein 1E... 0.04 Orthogroups_2024-Update
At2g46310 No alias Ethylene-responsive transcription factor CRF5... 0.06 Orthogroups_2024-Update
At3g23230 No alias Ethylene-responsive transcription factor ERF098... 0.03 Orthogroups_2024-Update
At3g23240 No alias Ethylene-responsive transcription factor 1B... 0.05 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.03 Orthogroups_2024-Update
At4g11140 No alias Ethylene-responsive transcription factor CRF1... 0.04 Orthogroups_2024-Update
At4g17500 No alias Ethylene-responsive transcription factor 1A... 0.05 Orthogroups_2024-Update
At4g28140 No alias Ethylene-responsive transcription factor ERF054... 0.05 Orthogroups_2024-Update
At5g13330 No alias Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8] 0.03 Orthogroups_2024-Update
At5g13910 No alias LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2] 0.03 Orthogroups_2024-Update
At5g47230 No alias ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9] 0.04 Orthogroups_2024-Update
At5g61890 No alias Ethylene-responsive transcription factor ERF114... 0.02 Orthogroups_2024-Update
Bradi1g71740 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g72449 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g06562 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Bradi3g51630 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
Brara.I00861.1 No alias subgroup ERF-II-DEAR transcription factor 0.04 Orthogroups_2024-Update
Brara.I01789.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.K00718.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G016434 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G019443 No alias related to AP2 11 0.02 Orthogroups_2024-Update
GRMZM2G060876 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G103085 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G434203 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G261700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G112000 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.03G138900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G041200 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
Glyma.04G147500 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G015900 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.05G157400 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.07G017300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Glyma.15G095600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G024300 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G195900 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G103660.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G062430.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G074970.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G082880.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os01g21120 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g07830 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46440 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g39330 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_16778g0010 No alias (at5g05410 : 117.0) Encodes a transcription factor that... 0.03 Orthogroups_2024-Update
MA_28894g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_356609g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_65877g0010 No alias (at3g16280 : 101.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
Mp7g00860.1 No alias transcription factor (DREB) 0.02 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00008357-RA No alias (at5g21960 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00008897-RA No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.06 Orthogroups_2024-Update
PSME_00041851-RA No alias (at1g21910 : 102.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00046682-RA No alias (at3g16770 : 96.3) Encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G094800 No alias cytokinin response factor 2 0.03 Orthogroups_2024-Update
Potri.001G110500 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.002G085600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G233300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G054500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G138700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G147700 No alias dehydration response element B1A 0.03 Orthogroups_2024-Update
Potri.012G134000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G046700 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Potri.014G046800 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.014G126100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s105_212V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s124_33V6 No alias ap2 erf domain-containing transcription factor 0.06 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s14_458V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.06 Orthogroups_2024-Update
Pp1s233_111V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s276_3V6 No alias transcriptional factor 0.03 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s60_269V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s6_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s81_44V6 No alias dre-binding protein 2 0.03 Orthogroups_2024-Update
Seita.1G187800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G271000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G051200.1 No alias subgroup ERF-V transcription factor 0.02 Orthogroups_2024-Update
Seita.5G320400.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.6G181700.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G169400.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.001G481600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G158901.1 No alias subgroup ERF-X transcription factor 0.06 Orthogroups_2024-Update
Sobic.009G238500.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G052600.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Solyc01g090560 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc03g093540 No alias Ethylene-responsive transcription factor 5 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g124110 No alias CBF 0.04 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.03 Orthogroups_2024-Update
Solyc06g068360 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Sopen03g005150 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g024410 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g039660 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen04g029080 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 99
No external refs found!