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Description : Nucleic acid-binding, OB-fold-like protein [Source:TAIR;Acc:AT3G48500]
Gene families : OG_42_0008388 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008388_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At3g48500 | |
| Cluster | HCCA clusters: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 438805 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.04 | Orthogroups_2024-Update | |
| Bradi2g57887 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.04 | Orthogroups_2024-Update | |
| Brara.A02382.1 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) | 0.03 | Orthogroups_2024-Update | |
| Kfl00306_0020 | kfl00306_0020_v1.1 | (at3g48500 : 155.0) PIGMENT DEFECTIVE 312 (PDE312);... | 0.02 | Orthogroups_2024-Update | |
| Pp1s3_467V6 | No alias | constans interacting protein 5 | 0.02 | Orthogroups_2024-Update | |
| Seita.5G417800.1 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G392000.1 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) | 0.03 | Orthogroups_2024-Update | |
| Solyc03g111050 | No alias | CONSTANS interacting protein 5 | 0.03 | Orthogroups_2024-Update | |
| Sopen03g030220 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
| MF | GO:0004629 | phospholipase C activity | IEP | Predicted GO |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
| BP | GO:0006353 | DNA-templated transcription, termination | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| CC | GO:0042555 | MCM complex | IEP | Predicted GO |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
| BP | GO:0051095 | regulation of helicase activity | IEP | Predicted GO |
| BP | GO:0051097 | negative regulation of helicase activity | IEP | Predicted GO |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Predicted GO |
| BP | GO:0051346 | negative regulation of hydrolase activity | IEP | Predicted GO |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | Predicted GO |
| BP | GO:1905463 | negative regulation of DNA duplex unwinding | IEP | Predicted GO |
| BP | GO:1905774 | regulation of DNA helicase activity | IEP | Predicted GO |
| BP | GO:1905775 | negative regulation of DNA helicase activity | IEP | Predicted GO |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |