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  5. Sobic.002G359300.2

Sobic.002G359300.2


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G359300.2
Cluster HCAA Clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Brara.C01069.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.E00765.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G073300 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.14G088300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Glyma.17G236200 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.02 Orthogroups_2024-Update
Potri.001G235800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Potri.016G098100 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Pp1s286_28V6 No alias cys2 his2 zinc-finger transcription factor 0.04 Orthogroups_2024-Update
Seita.2G373600.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G349600.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G351700.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Solyc06g075780 No alias Zinc finger, C2H2 (AHRD V3.3 *** A0A103Y6U7_CYNCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!