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  5. Sobic.002G361600.1

Sobic.002G361600.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G361600.1
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G013960 No alias C2H2-like zinc finger protein 0.05 Orthogroups_2024-Update
GRMZM2G133552 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
Glyma.01G036600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G121000 No alias telomerase activator1 0.03 Orthogroups_2024-Update
HORVU4Hr1G064150.1 No alias C2H2 subclass ZFP transcription factor 0.06 Orthogroups_2024-Update
LOC_Os08g36110 No alias ZOS8-06 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_424g0010 No alias (at5g48890 : 80.5) C2H2-like zinc finger protein;... 0.04 Orthogroups_2024-Update
Potri.009G037100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G474600.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!