Sobic.002G365100.1

Description : Unknown function

Gene families : OG_42_0003045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G365100.1
Cluster	HCAA Clusters: Cluster_442

Target	Alias	Description	ECC score	Gene Family Method
Kfl00145_0070	kfl00145_0070_v1.1	(at3g04500 : 204.0) RNA-binding (RRM/RBD/RNP motifs)...	0.03	Orthogroups_2024-Update
Solyc04g010020	No alias	RNA-binding protein (AHRD V3.3 *** A0A0K9NRG1_ZOSMR)	0.02	Orthogroups_2024-Update
Solyc04g010040	No alias	RNA-binding protein (AHRD V3.3 *** A0A0K9NRG1_ZOSMR)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	131	201

External Links

No external refs found!