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  5. Sobic.002G368100.1

Sobic.002G368100.1


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G368100.1
Cluster HCAA Clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
A4A49_19524 No alias protein cobra 0.02 Orthogroups_2024-Update
Glyma.13G053300 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Glyma.18G272000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
LOC_Os07g41320 No alias COBRA-like protein precursor, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00031482-RA No alias (q60e70|cobl3_orysa : 640.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
Seita.9G088500.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Sopen02g015980 No alias COBRA-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 61 224
No external refs found!