Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly
Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.002G368300.1 | |
Cluster | HCAA Clusters: Cluster_208 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_19524 | No alias | protein cobra | 0.03 | Orthogroups_2024-Update | |
Bradi1g59880 | No alias | COBRA-like extracellular glycosyl-phosphatidyl... | 0.04 | Orthogroups_2024-Update | |
Brara.C04212.1 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | Orthogroups_2024-Update | |
Potri.015G060100 | No alias | COBRA-like extracellular glycosyl-phosphatidyl... | 0.02 | Orthogroups_2024-Update | |
Potri.015G060200 | No alias | COBRA-like extracellular glycosyl-phosphatidyl... | 0.02 | Orthogroups_2024-Update | |
Sobic.001G336700.1 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0010215 | cellulose microfibril organization | IEA | 16Dec |
CC | GO:0016020 | membrane | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009250 | glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Predicted GO |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006918 | COBRA_pln | 45 | 208 |
No external refs found! |