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  5. Sobic.002G369800.1

Sobic.002G369800.1


Description : component *(NF-YB) of NF-Y transcription factor complex


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G369800.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
At1g09030 No alias Nuclear transcription factor Y subunit B-4... 0.03 Orthogroups_2024-Update
At2g13570 No alias Uncharacterized protein At2g13570 (Fragment)... 0.03 Orthogroups_2024-Update
Brara.I03626.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Glyma.09G014100 No alias nuclear factor Y, subunit B3 0.06 Orthogroups_2024-Update
LOC_Os02g49370 No alias histone-like transcription factor and archaeal histone,... 0.02 Orthogroups_2024-Update
LOC_Os07g41580 No alias histone-like transcription factor and archaeal histone,... 0.03 Orthogroups_2024-Update
LOC_Os08g07740 No alias histone-like transcription factor and archaeal histone,... 0.03 Orthogroups_2024-Update
MA_96911g0010 No alias "(at4g14540 : 200.0) ""nuclear factor Y, subunit B3""... 0.04 Orthogroups_2024-Update
Potri.013G019500 No alias nuclear factor Y, subunit B4 0.03 Orthogroups_2024-Update
Potri.013G019600 No alias nuclear factor Y, subunit B5 0.04 Orthogroups_2024-Update
Pp1s25_10V6 No alias ccaat-box binding factor hap3-like protein 0.02 Orthogroups_2024-Update
Sobic.009G239600.2 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Sopen07g033710 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.03 Orthogroups_2024-Update
Sopen12g002080 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 25 89
No external refs found!