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  5. Sobic.002G371800.2

Sobic.002G371800.2


Description : Unknown function


Gene families : OG_42_0000716 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G371800.2
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Brara.F01502.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G091233 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 Orthogroups_2024-Update
LOC_Os08g31250 No alias C1-like domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.010G205000 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Orthogroups_2024-Update
Solyc09g011260 No alias Cysteine/Histidine-rich C1 domain family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 69 112
IPR004146 DC1 13 57
No external refs found!