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  5. At3g48710

At3g48710


Description : At3g48710 [Source:UniProtKB/TrEMBL;Acc:Q9SMM8]


Gene families : OG_42_0001747 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g48710
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
At4g26630 No alias DEK domain-containing chromatin associated protein... 0.03 Orthogroups_2024-Update
Bradi1g15140 No alias DEK domain-containing chromatin associated protein 0.05 Orthogroups_2024-Update
Bradi2g59267 No alias DEK domain-containing chromatin associated protein 0.04 Orthogroups_2024-Update
Glyma.08G329100 No alias DEK domain-containing chromatin associated protein 0.03 Orthogroups_2024-Update
Glyma.08G329200 No alias DEK domain-containing chromatin associated protein 0.03 Orthogroups_2024-Update
Glyma.18G077600 No alias DEK domain-containing chromatin associated protein 0.04 Orthogroups_2024-Update
Glyma.18G077700 No alias DEK domain-containing chromatin associated protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G095450.1 No alias chromatin architectural modulator *(DEK) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR014876 DEK_C 385 436
No external refs found!