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  5. Sobic.002G374300.2

Sobic.002G374300.2


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G374300.2
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G072100 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
LOC_Os01g16660 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g45300 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.016G018300 No alias far-red elongated hypocotyls 3 0.03 Orthogroups_2024-Update
Potri.016G059200 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Sobic.002G275050.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007009 plasma membrane organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0017121 plasma membrane phospholipid scrambling IEP Predicted GO
MF GO:0017128 phospholipid scramblase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0034204 lipid translocation IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045332 phospholipid translocation IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
BP GO:0097035 regulation of membrane lipid distribution IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 324 418
IPR000679 Znf_GATA 44 78
IPR007527 Znf_SWIM 610 638
IPR004330 FAR1_DNA_bnd_dom 114 200
No external refs found!