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  5. Sobic.002G388500.2

Sobic.002G388500.2


Description : Unknown function


Gene families : OG_42_0002097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G388500.2
Cluster HCAA Clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre03.g156100 No alias SART-1 family 0.02 Orthogroups_2024-Update
Mp8g09130.1 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Sopen01g042940 No alias SART-1 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 187 669
IPR005011 SNU66/SART1 691 737
No external refs found!