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  5. Sobic.002G397600.1

Sobic.002G397600.1


Description : Unknown function


Gene families : OG_42_0002410 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G397600.1
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
440463 No alias protein serine/threonine phosphatases;protein... 0.03 Orthogroups_2024-Update
GRMZM2G053722 No alias protein serine/threonine phosphatases;protein... 0.04 Orthogroups_2024-Update
GRMZM2G122258 No alias protein serine/threonine phosphatases;protein... 0.03 Orthogroups_2024-Update
Potri.008G198700 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Potri.018G084900 No alias protein serine/threonine phosphatases;protein... 0.03 Orthogroups_2024-Update
Pp1s7_224V6 No alias protein phosphatase 0.02 Orthogroups_2024-Update
Seita.2G412800.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 63 308
No external refs found!