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At3g49020


Description : FBD-associated F-box protein At3g49020 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMT9]


Gene families : OG_42_0000413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g49020
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
At3g52690 No alias RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J826] 0.03 Orthogroups_2024-Update
At4g26340 No alias F-box/FBD/LRR-repeat protein At4g26340... 0.03 Orthogroups_2024-Update
Brara.A01625.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03750.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 362 407
IPR001810 F-box_dom 23 61
IPR013101 Leu-rich_rpt_2 169 194
No external refs found!