Sobic.002G415600.1

Description : subgroup ERF-VII transcription factor & transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G415600.1
Cluster	HCAA Clusters: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
92334	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
A4A49_13998	No alias	ethylene-responsive transcription factor 4	0.03	Orthogroups_2024-Update
AC209257.4_FG006	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi1g23756	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Bradi1g72457	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g04000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g12680	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g18070	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G138396	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
Glyma.08G137600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G202300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G242600	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.15G018400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.15G079100	No alias	ethylene responsive element binding factor 2	0.03	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
HORVU1Hr1G070410.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU1Hr1G090250.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g08500	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g09717	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g22770	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g38750	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_2040g0010	No alias	(at5g65130 : 90.5) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_329325g0010	No alias	(at4g17500 : 94.0) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
Mp7g17020.1	No alias	Dehydration-responsive element-binding protein 2C...	0.02	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
PSME_00050134-RA	No alias	(at5g19790 : 92.0) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00052454-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Potri.001G110700	No alias	C-repeat-binding factor 4	0.02	Orthogroups_2024-Update
Potri.010G163900	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Seita.2G080100.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.2G230500.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Seita.3G368800.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Seita.7G109400.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G531100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G225700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.003G369100.3	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G145000.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Sobic.009G184300.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc03g093550	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004559	alpha-mannosidase activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006013	mannose metabolic process	IEP	Predicted GO
MF	GO:0015923	mannosidase activity	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	70	118

External Links

No external refs found!

Sobic.002G415600.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation