Sobic.002G420700.1

Description : NAC-type transcription factor

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G420700.1
Cluster	HCAA Clusters: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
A4A49_25676	No alias	nac transcription factor 25	0.02	Orthogroups_2024-Update
A4A49_40664	No alias	nac transcription factor 56	0.03	Orthogroups_2024-Update
At3g15510	No alias	NAC transcription factor 56...	0.03	Orthogroups_2024-Update
Brara.E02590.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G011598	No alias	NAC domain containing protein 47	0.02	Orthogroups_2024-Update
GRMZM2G083347	No alias	NAC domain containing protein 83	0.02	Orthogroups_2024-Update
Glyma.01G051300	No alias	NAC-like, activated by AP3/PI	0.04	Orthogroups_2024-Update
Glyma.06G157400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.07	Orthogroups_2024-Update
LOC_Os01g66490	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g34600	No alias	no apical meristem protein, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os07g37920	No alias	no apical meristem protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_10434250g0010	No alias	(at2g02450 : 274.0) NAC domain containing protein 35...	0.03	Orthogroups_2024-Update
MA_264971g0010	No alias	(q52qh4\|nac68_orysa : 256.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
PSME_00029399-RA	No alias	(q52qh4\|nac68_orysa : 261.0) NAC domain-containing...	0.06	Orthogroups_2024-Update
PSME_00030259-RA	No alias	(q7f2l3\|nac48_orysa : 263.0) NAC domain-containing...	0.02	Orthogroups_2024-Update
PSME_00035776-RA	No alias	(at3g15510 : 277.0) Note of caution: not to be confused...	0.04	Orthogroups_2024-Update
PSME_00039090-RA	No alias	(at1g01720 : 226.0) Belongs to a large family of...	0.03	Orthogroups_2024-Update
PSME_00050136-RA	No alias	(q52qh4\|nac68_orysa : 294.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00050686-RA	No alias	(q52qh4\|nac68_orysa : 274.0) NAC domain-containing...	0.04	Orthogroups_2024-Update
Potri.005G069500	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.019G031400	No alias	NAC domain containing protein 47	0.02	Orthogroups_2024-Update
Seita.2G436000.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.3G319900.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G069100.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G405100.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G008100.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.9G417600.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G334600.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G094700.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Solyc06g060230	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Sopen01g005390	No alias	No apical meristem (NAM) protein	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
BP	GO:0015858	nucleoside transport	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:1901264	carbohydrate derivative transport	IEP	Predicted GO
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predicted GO
BP	GO:1901642	nucleoside transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	20	146

External Links

No external refs found!

Sobic.002G420700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation