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At3g49180


Description : Protein ROOT INITIATION DEFECTIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B4]


Gene families : OG_42_0003575 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g49180
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
442453 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g19780 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.F01618.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G252500 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 264 291
IPR001680 WD40_repeat 167 203
IPR001680 WD40_repeat 110 148
No external refs found!