Sobic.002G421900.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G421900.1
Cluster	HCAA Clusters: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
89924	No alias	cycling DOF factor 1	0.04	Orthogroups_2024-Update
A4A49_33558	No alias	dof zinc finger protein dof1.4	0.02	Orthogroups_2024-Update
A4A49_34579	No alias	dof zinc finger protein pbf	0.03	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
At1g29160	No alias	Uncharacterized protein At1g29160 (Fragment)...	0.03	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At3g50410	No alias	OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]	0.02	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.03	Orthogroups_2024-Update
Bradi1g03710	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Bradi3g56380	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
GRMZM2G134545	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
GRMZM2G162749	No alias	cycling DOF factor 1	0.06	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.04G168300	No alias	cycling DOF factor 3	0.08	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.05	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.06	Orthogroups_2024-Update
Glyma.08G276300	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.19G023200	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
HORVU5Hr1G021290.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
LOC_Os03g07360	No alias	expressed protein	0.04	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.08	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Seita.2G436800.1	No alias	transcription factor *(DOF)	0.09	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G033400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G452000.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.03	Orthogroups_2024-Update
Solyc03g115940	No alias	Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA)	0.07	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.06	Orthogroups_2024-Update
Sopen03g034940	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g026650	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g027050	No alias	Dof domain, zinc finger	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006749	glutathione metabolic process	IEP	Predicted GO
BP	GO:0006751	glutathione catabolic process	IEP	Predicted GO
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
MF	GO:0016851	magnesium chelatase activity	IEP	Predicted GO
BP	GO:0030163	protein catabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Predicted GO
BP	GO:0043171	peptide catabolic process	IEP	Predicted GO
BP	GO:0044273	sulfur compound catabolic process	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predicted GO
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predicted GO
BP	GO:0051187	cofactor catabolic process	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	105	162

External Links

No external refs found!

Sobic.002G421900.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation