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  5. Sobic.002G427100.1

Sobic.002G427100.1


Description : cell cycle replicated DNA checkpoint protein *(TopBP1)


Gene families : OG_42_0003997 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003997_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G427100.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
437359 No alias transcription coactivators 0.02 Orthogroups_2024-Update
Seita.9G432000.1 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 1286 1332
IPR001357 BRCT_dom 17 91
IPR001357 BRCT_dom 1059 1117
IPR001357 BRCT_dom 119 182
No external refs found!