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  5. Sobic.002G429000.2

Sobic.002G429000.2


Description : pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G429000.2
Cluster HCAA Clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AC197705.4_FG001 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.04 Orthogroups_2024-Update
LOC_Os05g39310 No alias thiamine pyrophosphate enzyme, C-terminal TPP binding... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
MF GO:0030976 thiamine pyrophosphate binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR011766 TPP_enzyme-bd_C 403 466
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 43 98
No external refs found!