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  5. Sobic.003G000400.1

Sobic.003G000400.1


Description : anion channel *(SLAC)


Gene families : OG_42_0000546 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000546_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G000400.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Bradi2g15500 No alias SLAC1 homologue 2 0.03 Orthogroups_2024-Update
Brara.H01500.1 No alias anion channel *(SLAC) 0.05 Orthogroups_2024-Update
GRMZM2G080887 No alias SLAC1 homologue 2 0.03 Orthogroups_2024-Update
GRMZM2G106921 No alias C4-dicarboxylate transporter/malic acid transport protein 0.03 Orthogroups_2024-Update
GRMZM2G331393 No alias SLAC1 homologue 2 0.03 Orthogroups_2024-Update
Glyma.04G027300 No alias SLAC1 homologue 1 0.02 Orthogroups_2024-Update
Glyma.16G173600 No alias SLAC1 homologue 3 0.03 Orthogroups_2024-Update
LOC_Os05g13320 No alias C4-dicarboxylate transporter/malic acid transport... 0.03 Orthogroups_2024-Update
Pp1s78_52V6 No alias tellurite resistance protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004695 Voltage-dep_anion_channel 70 389
No external refs found!