1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G015000.1

Sobic.003G015000.1


Description : jasmonoyl-amino acid synthetase *(JAR1)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G015000.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
73348 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
A4A49_27021 No alias putative indole-3-acetic acid-amido synthetase gh3.1 0.03 Orthogroups_2024-Update
At1g48690 No alias At1g48690 [Source:UniProtKB/TrEMBL;Acc:Q9C737] 0.04 Orthogroups_2024-Update
At5g51470 No alias Auxin-responsive GH3 family protein... 0.02 Orthogroups_2024-Update
At5g54510 No alias GH3.6 [Source:UniProtKB/TrEMBL;Acc:A0A178UBG0] 0.03 Orthogroups_2024-Update
Bradi1g23840 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Brara.I05219.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02099.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G091276 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G154600 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Glyma.05G101300 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.17G165300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
PSME_00043985-RA No alias (at5g54510 : 804.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Potri.011G129700 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Seita.2G375300.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.04 Orthogroups_2024-Update
Sopen10g005450 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 31 578
No external refs found!